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Biochemistry and Molecular Biophysics

Experimental, computational and theoretical methods and techniques from chemistry have played crucial roles in the elucidation of the molecular basis of life. Challenges posed by specific biological problems are driving the development of new analytical tools and prompting advances in the physical and chemical sciences. Chemists increasingly take inspiration from and/or directly use biological processes to develop structures and materials with novel chemical functions.

Ph.D. students choose from graduate classes in Biochemistry, Molecular Cell Biology, Molecular and Cell Biophysics, Bio Imaging and Spectroscopy, Molecular Dynamics and Biomolecular Simulation, Biophysics, Molecular Quantum Chemistry, Statistical Thermodynamics, Molecular Spectroscopy.

Three proteins of the cyanobacterial circadian clock that form a self-sustained circadian oscillator when combined with ATP, courtesy of Professor Andy LiWang.Many faculty members work at the dynamic interface between chemistry and biology.

Mike Colvin's group works on modeling semi-structured biomolecular systems with molecular dynamics simulations. 

Andy LiWang's group is resolving the structural and biochemical basis of rhythmicity of the circadian clock, which is used for time keeping in life cycles. 

Patti LiWang's group determines the structure of chemokines and how they affect HIV and inflammatory diseases.

Eva de Alba's lab studies the regulation of inflammation and cell death at the molecular level using a variety of biophysical techniques (e.g., NMR, TEM, optical tweezers/fluorescence microscopy) and designs proteins to function as biologics and for different biotechnological applications.

The Noy group studies molecular transport and signal transduction across nanoscale interfaces and develops biomimetic nanostructures that facilitate the creation of bioelectronic devices and circuits.

The Sukenik lab develops live-cell microscopy methods, and combines them with spectroscopy and computational modeling to understand the complex interplay between proteins and the cellular environment in health and disease.

The Ye group is engaged in the hierarchical self-assembly of nucleic acid nanostructures as well as the development of new tools to analyze single DNA molecules.

ThompsonThe Thompson Lab is creating new experimental methods that combine temperature perturbations with X-ray crystallography and other techniques, allowing them to explore the conformational landscapes of protein molecules and identify the structural states that define their biological activities.

ZoghbiThe Zoghbi group studies the structure and function of membrane transport proteins using biochemical, spectroscopic, and electron microscopy techniques.

The Subramaniam lab is developing new experimental techniques using in vitro synthetic cells to understand fundamental physicochemical mechanisms that govern the assembly and function of biomembranes and proteins.

MunozThe Muñoz group uses experimental and computational protein biochemistry and engineering, and aims to understand protein folding, function and disease and the molecular mechanisms of gene expression, as well as develop novel technologies such as fluorescence biosensors, molecular diagnostics, and allosteric nanoassemblies.